Miyakogusa Predicted Gene

Lj2g3v3184310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KM46_SOYBN 1056 72.4 82.3 (tr|K7KM46) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G26540.1 761 54.8 70.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9744542-9746644 REVERSE LENGTH=700
Medicago Medtr3g088820.1 987 71.0 82.7 | PPR containing plant-like protein | HC | chr3:40646143-40648516 | 20130731
Soybean Glyma04g42230.1 934 76.6 87.0  
LJGI gnl|LJGI|DC595045 402 100.0 100.0 weakly similar to UniRef100_A7NSQ1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3184310.1 length: 695 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.35 101-122
128-157
200-222
228-253
329-359
360-386
635-658
HMMPfam PF13041 PPR_2 2.8e-12 460-506
560-607
HMMPfam PF13812 PPR_3 0.15 433-458
HMMTigr TIGR00756 PPR: 2.4e-07 228-253
329-359
360-386
563-595
ProfileScan PS51375 PPR 6.774 94-124
125-159
226-260
195-225
160-194
327-361
296-326
362-388
460-490
428-458
494-528
560-594
529-559
595-629
631-665
no_ID  
HMMPanther PTHR24015 FAMILY 5.8e-247 57-692
HMMPanther PTHR24015:SF72 SUBFAMILY 5.8e-247 57-692
Seg seg seg NA 27-37
Wolf-PSORT
Lj2g3v3184310.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3184310.1