Miyakogusa Predicted Gene
- Lj2g3v3184230.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JJB3_SOYBN |
120 |
96.6 |
98.3 |
(tr|I1JJB3) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT3G20475.1 |
98.6 |
78.0 |
89.8 |
| Symbols: ATMSH5, MSH5 | MUTS-homologue 5 | chr3:7143546-7150811 FORWARD LENGTH=807 |
| Medicago |
Medtr5g093110.1 |
113 |
91.5 |
93.2 |
| DNA mismatch repair protein MutS | HC | chr5:40657110-40644297 | 20130731 |
| Soybean |
Glyma02g46180.1 |
120 |
96.6 |
98.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3184230.2 |
length: 67 aa. |
| IPR007696 |
DNA mismatch repair protein MutS, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006298 |
mismatch repair |
|
|
| Molecular Function |
GO:0030983 |
mismatched DNA binding |
|
|
| HMMPfam |
PF05192 |
MutS_III |
1.1e-14 |
9-66 |
| superfamily |
SSF48334 |
DNA |
2.6e-14 |
10-67 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.1420.10 |
no description |
7.9e-18 |
9-67 |
| HMMPanther |
PTHR11361 |
DNA |
2.3e-33 |
9-67 |
| HMMPanther |
PTHR11361:SF17 |
MUTS |
2.3e-33 |
9-67 |
- Wolf-PSORT
Lj2g3v3184230.2 nucl 6, chlo 4, mito 2, vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3184230.2 |
|