Miyakogusa Predicted Gene
- Lj2g3v3149380.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SHL6_LOTJA |
197 |
83.2 |
83.2 |
(tr|I3SHL6) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT3G20510.1 |
140 |
58.8 |
68.9 |
| Symbols: | Transmembrane proteins 14C | chr3:7160884-7161991 FORWARD LENGTH=119 |
| Medicago |
Medtr5g092160.1 |
164 |
65.3 |
76.0 |
| transmembrane protein 14C | HC | chr5:40248249-40245870 | 20130731 |
| Soybean |
Glyma14g02810.1 |
174 |
71.4 |
76.5 |
|
| LJGI |
gnl|LJGI|GO010247 |
698 |
99.4 |
99.4 |
similar to UniRef100_A7P0S6 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3149380.1 |
length: 119 aa. |
| IPR005349 |
Uncharacterised protein family UPF0136, Transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR12668 |
TRANSMEMBRANE |
1.1e-37 |
1-119 |
| HMMPfam |
PF03647 |
Tmemb_14 |
1.7e-27 |
4-105 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
26-45 |
- Wolf-PSORT
Lj2g3v3149380.1 chlo 5, plas 3, chlo_mito 3, E.R. 2, nucl_plas 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3149380.1 |
|