Miyakogusa Predicted Gene
- Lj2g3v3121040.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SGI4_LOTJA |
519 |
99.2 |
99.2 |
(tr|I3SGI4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G06460.1 |
181 |
41.2 |
57.0 |
| Symbols: ACD32.1, ACD31.2 | alpha-crystallin domain 32.1 | chr1:1967308-1969414 REVERSE LENGTH=285 |
| Medicago |
Medtr5g091960.1 |
362 |
68.1 |
79.2 |
| peroxisomal small heat shock protein | HC | chr5:40143233-40140255 | 20130731 |
| Soybean |
Glyma02g45810.1 |
353 |
68.4 |
79.5 |
|
| LJGI |
gnl|LJGI|TC62935 |
1263 |
99.4 |
99.4 |
weakly similar to UniRef100_A7VJH1 Cluster: 26-kD peroxisomal membrane protein; n=1; Arabidopsis thaliana|Rep: 26-kD peroxisomal membrane protein - Arabidopsis thaliana (Mouse-ear cress), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3121040.1 |
length: 253 aa. |
| IPR002068 |
Alpha crystallin/Hsp20 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00011 |
HSP20 |
1.2e-13 |
154-251 |
| ProfileScan |
PS01031 |
HSP20 |
17.862 |
154-250 |
| IPR008978 |
HSP20-like chaperone |
| superfamily |
SSF49764 |
HSP20-like |
4.2e-21 |
141-250 |
| no_ID |
|
| Gene3D |
G3DSA:2.60.40.790 |
no description |
1.6e-20 |
147-251 |
| HMMPanther |
PTHR11527 |
SMALL |
7.7e-38 |
146-253 |
| HMMPanther |
PTHR11527:SF60 |
PREDICTED: |
7.7e-38 |
146-253 |
- Wolf-PSORT
Lj2g3v3121040.1 chlo 5, extr 3, chlo_mito 3, nucl 2, cyto 2, cyto_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3121040.1 |
|