Miyakogusa Predicted Gene

Lj2g3v3110960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K3F1_MEDTR 949 89.5 94.7 (tr|G7K3F1) Citrate synthase OS=Medicago truncatula GN=MTR_5g091930 PE=3 SV=1
TAIR_pep AT2G42790.1 844 79.7 88.2 | Symbols: CSY3 | citrate synthase 3 | chr2:17803132-17805991 REVERSE LENGTH=509
Medicago Medtr5g091930.1 949 89.5 94.7 | citrate synthase 3, peroxisomal protein | HC | chr5:40119197-40123930 | 20130731
Soybean Glyma14g03000.1 932 87.9 94.1  
LJGI gnl|LJGI|TC73380 955 99.8 99.8 similar to UniRef100_Q9SJH7 Cluster: Citrate synthase 3, peroxisomal precursor; n=2; Arabidopsis thaliana|Rep: Citrate synthase 3, peroxisomal precursor - Arabidopsis thaliana (Mouse-ear cress), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3110960.1 length: 512 aa.
IPR002020 Citrate synthase-like
method AccNumber shortName E-value location
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
FPrintScan PR00143 CITRTSNTHASE 4.7e-45 225-238
279-294
301-329
354-374
416-432
436-450
HMMPanther PTHR11739 CITRATE 2.9e-203 39-512
HMMPfam PF00285 Citrate_synt 3.8e-129 99-467
IPR016141 Citrate synthase-like, core
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
superfamily SSF48256 Citrate 9.3e-149 96-486
IPR016142 Citrate synthase-like, large alpha subdomain
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
Gene3D G3DSA:1.10.580.10 no description 1.6e-90 106-340
IPR016143 Citrate synthase-like, small alpha subdomain
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
Gene3D G3DSA:1.10.230.10 no description 2.9e-39 341-430
IPR019810 Citrate synthase active site
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
PatternScan PS00480 CITRATE_SYNTHASE NA 361-373
no_ID  
HMMPanther PTHR11739:SF0 SUBFAMILY 2.9e-203 39-512
Wolf-PSORT
Lj2g3v3110960.1	cyto 10, chlo 1, nucl 1, mito 1, pero 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3110960.1