Miyakogusa Predicted Gene

Lj2g3v3106300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K3C5_MEDTR 842 77.5 86.9 (tr|G7K3C5) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g091640 PE=4 SV=1
TAIR_pep AT2G42920.1 614 58.4 72.4 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr2:17858705-17860384 FORWARD LENGTH=559
Medicago Medtr5g091640.1 842 77.5 86.9 | PPR containing plant-like protein | HC | chr5:39962522-39960655 | 20130731
Soybean Glyma14g03230.1 864 79.9 88.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3106300.1 length: 528 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.83 157-182
186-210
288-310
318-346
390-413
420-439
HMMPfam PF13041 PPR_2 7.1e-16 81-129
215-261
HMMTigr TIGR00756 PPR: 5.2e-05 186-210
216-250
318-350
ProfileScan PS51375 PPR 6.116 82-116
117-151
214-248
183-213
152-182
284-318
249-283
319-349
418-448
386-416
350-380
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.9e-06 281-400
415-474
no_ID  
HMMPanther PTHR24015 FAMILY 7e-214 26-521
HMMPanther PTHR24015:SF61 PGR3 7e-214 26-521
Seg seg seg NA 2-13
400-409
superfamily SSF48452 TPR-like 0.00017 418-474
Wolf-PSORT
Lj2g3v3106300.1	chlo 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3106300.1