Miyakogusa Predicted Gene

Lj2g3v3106160.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1M987_SOYBN 206 72.3 84.6 (tr|I1M987) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G31840.1 151 61.3 80.2 | Symbols: ENODL15, AtENODL15 | early nodulin-like protein 15 | chr4:15401798-15402426 FORWARD LENGTH=177

Medicago Medtr3g105930.1 188 77.4 94.3 | early nodulin-like protein | HC | chr3:48854561-48853915 | 20130731

Soybean Glyma14g11760.1 206 72.3 84.6

LJGI gnl|LJGI|TC59781 1118 100.0 100.0 similar to UniRef100_A2Q2Y8 Cluster: Blue (Type 1) copper domain; n=1; Medicago truncatula|Rep: Blue (Type 1) copper domain - Medicago truncatula (Barrel medic), partial (74%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v3106160.1 length: 187 aa.

IPR003245 Plastocyanin-like

method AccNumber shortName E-value location

Molecular Function GO:0005507 copper ion binding

Molecular Function GO:0009055 electron carrier activity

BlastProDom PD003122 Q9M0A1_ARATH_Q9M0A1; 1e-21 64-131

HMMPfam PF02298 Cu_bind_like 4.2e-28 38-123

ProfileScan PS51485 PHYTOCYANIN 39.341 27-131

IPR008972 Cupredoxin

Gene3D G3DSA:2.60.40.420 no description 2.8e-35 26-133

superfamily SSF49503 Cupredoxins 1.1e-33 25-131

no_ID

Seg seg seg NA 9-26
142-152
158-168
173-186

Wolf-PSORT

Lj2g3v3106160.1 chlo 5, extr 4, vacu 3, mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v3106160.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1M987_SOYBN	206	72.3	84.6	(tr\|I1M987) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G31840.1	151	61.3	80.2	\| Symbols: ENODL15, AtENODL15 \| early nodulin-like protein 15 \| chr4:15401798-15402426 FORWARD LENGTH=177
Medicago	Medtr3g105930.1	188	77.4	94.3	\| early nodulin-like protein \| HC \| chr3:48854561-48853915 \| 20130731
Soybean	Glyma14g11760.1	206	72.3	84.6
LJGI	gnl\|LJGI\|TC59781	1118	100.0	100.0	similar to UniRef100_A2Q2Y8 Cluster: Blue (Type 1) copper domain; n=1; Medicago truncatula\|Rep: Blue (Type 1) copper domain - Medicago truncatula (Barrel medic), partial (74%)

IPR003245	Plastocyanin-like
Lj2g3v3106160.1				length: 187 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005507	copper ion binding
Molecular Function	GO:0009055	electron carrier activity
BlastProDom	PD003122	Q9M0A1_ARATH_Q9M0A1;	1e-21	64-131
HMMPfam	PF02298	Cu_bind_like	4.2e-28	38-123
ProfileScan	PS51485	PHYTOCYANIN	39.341	27-131
IPR008972	Cupredoxin
Gene3D	G3DSA:2.60.40.420	no description	2.8e-35	26-133
superfamily	SSF49503	Cupredoxins	1.1e-33	25-131
no_ID
Seg	seg	seg	NA	9-26 142-152 158-168 173-186