Miyakogusa Predicted Gene

Lj2g3v3106130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M984_SOYBN 942 88.0 93.5 (tr|I1M984) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G31180.2 724 66.1 80.0 | Symbols: | Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:15156696-15159362 FORWARD LENGTH=558
Medicago Medtr1g014140.1 937 87.6 93.3 | aspartate-tRNA ligase | HC | chr1:3102208-3107666 | 20130731
Soybean Glyma14g11710.3 942 88.0 93.5  
LJGI gnl|LJGI|TC62839 3221 99.9 99.9 similar to UniRef100_A7P536 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3106130.1 length: 541 aa.
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
FPrintScan PR01042 TRNASYNTHASP 2.9e-22 286-298
303-316
456-472
496-510
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 1.2e-77 215-535
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 4.2e-05 94-177
IPR004523 Aspartyl-tRNA synthetases
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004815 aspartate-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006422 aspartyl-tRNA aminoacylation    
HMMPanther PTHR22594:SF10 SUBFAMILY 4e-267 13-541
HMMTigr TIGR00458 aspS_nondisc: 6.7e-138 88-541
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 18.738 236-533
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.1e-37 58-186
superfamily SSF50249 Nucleic 1.3e-30 56-187
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 4e-267 13-541
no_ID  
Coil coil coiled-coil NA 20-41
Gene3D G3DSA:3.30.930.10 no description 2.8e-116 213-540
Seg seg seg NA 2-19
20-33
40-47
superfamily SSF55681 Class 1.8e-96 211-541
Wolf-PSORT
Lj2g3v3106130.1	cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3106130.1