Miyakogusa Predicted Gene

Lj2g3v3088170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9FMK1_ORYSJ 273 97.0 99.3 (tr|B9FMK1) Tubulin gamma chain OS=Oryza sativa subsp. japonica GN=OsJ_17184 PE=2 SV=1
TAIR_pep AT5G05620.1 266 96.3 98.5 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin complex protein 2 | chr5:1679340-1681719 FORWARD LENGTH=474
Medicago Medtr7g117050.1 267 97.0 98.5 | tubulin | HC | chr7:48332494-48327570 | 20130731
Soybean Glyma03g41670.2 266 96.3 98.5  
LJGI gnl|LJGI|TC62327 416 97.4 97.4 homologue to UniRef100_A7PZS0 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3088170.1 length: 144 aa.
IPR000217 Tubulin
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
Biological Process GO:0007017 microtubule-based process    
FPrintScan PR01161 TUBULIN 1.1e-12 5-26
31-44
45-65
HMMPanther PTHR11588 TUBULIN 6e-82 1-133
IPR002454 Gamma tubulin
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
Biological Process GO:0007017 microtubule-based process    
FPrintScan PR01164 GAMMATUBULIN 7.7e-12 45-58
103-114
IPR003008 Tubulin/FtsZ, GTPase domain
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
Gene3D G3DSA:3.40.50.1440 no description 2.3e-40 1-121
HMMPfam PF00091 Tubulin 2.4e-18 2-78
superfamily SSF52490 Tubulin 7.8e-25 1-98
IPR008280 Tubulin/FtsZ, C-terminal
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
superfamily SSF55307 Tubulin 5.4e-11 99-129
no_ID  
HMMPanther PTHR11588:SF7 TUBULIN 6e-82 1-133
Wolf-PSORT
Lj2g3v3088170.1	chlo 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3088170.1