Miyakogusa Predicted Gene

Lj2g3v3084320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SSE0_LOTJA 372 95.8 97.4 (tr|I3SSE0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G43000.1 82.0 66.7 85.2 | Symbols: anac042, NAC042 | NAC domain containing protein 42 | chr2:17880617-17882584 REVERSE LENGTH=275
Medicago Medtr5g090970.2 105 73.2 83.1 | transcription factor jungbrunnen-like protein | HC | chr5:39632529-39636278 | 20130731
Soybean Glyma08g41990.1 89.4 70.5 86.9  
LJGI gnl|LJGI|TC59003 1011 97.4 97.4 similar to UniRef100_A7QEE3 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3084320.1 length: 191 aa.
IPR001232 SKP1 component
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMSmart SM00512 Found 0.00012 71-179
IPR003441 No apical meristem (NAM) protein
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02365 NAM 3e-13 19-66
ProfileScan PS51005 NAC 11.638 18-173
superfamily SSF101941 NAC 2e-11 2-63
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 3.6e-19 73-190
superfamily SSF54695 POZ 7.6e-09 72-137
IPR016073 SKP1 component, POZ
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF03931 Skp1_POZ 1.7e-09 73-132
no_ID  
HMMPanther PTHR31555 FAMILY 9.2e-23 1-62
Wolf-PSORT
Lj2g3v3084320.1	nucl 8, cyto 3, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3084320.1