Miyakogusa Predicted Gene

Lj2g3v3072930.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M710_SOYBN 393 75.8 83.1 (tr|I1M710) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G08560.2 265 50.2 64.9 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:2771104-2773827 REVERSE LENGTH=589
Medicago Medtr5g090420.1 388 74.2 81.9 | transducin/WD40 repeat protein | HC | chr5:39373338-39377755 | 20130731
Soybean Glyma14g03550.2 393 75.8 83.1  
LJGI gnl|LJGI|TC61565 1461 98.7 98.7 weakly similar to UniRef100_A7QNP3 Cluster: Chromosome undetermined scaffold_133, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_133, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3072930.1 length: 262 aa.
IPR006594 LisH dimerisation motif
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50896 LISH 8.078 62-94
IPR006595 CTLH, C-terminal LisH motif
HMMSmart SM00668 C-terminal 2.5e-05 95-152
ProfileScan PS50897 CTLH 10.072 95-152
no_ID  
HMMPanther PTHR22838 WD 2.3e-49 35-260
Seg seg seg NA 15-31
195-206
Wolf-PSORT
Lj2g3v3072930.1	nucl 5, cyto 4, mito 3, cysk 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3072930.1