Miyakogusa Predicted Gene
- Lj2g3v3070850.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M721_SOYBN |
216 |
83.6 |
93.0 |
(tr|I1M721) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G59030.1 |
173 |
70.0 |
84.2 |
| Symbols: TT12, ATTT12 | MATE efflux family protein | chr3:21819124-21821288 FORWARD LENGTH=507 |
| Medicago |
Medtr5g090290.1 |
213 |
84.4 |
90.6 |
| MATE efflux family protein | HC | chr5:39315188-39318110 | 20130731 |
| Soybean |
Glyma14g03620.1 |
216 |
83.6 |
93.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3070850.2 |
length: 129 aa. |
| IPR002528 |
Multi antimicrobial extrusion protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006855 |
drug transmembrane transport |
|
|
| Molecular Function |
GO:0015238 |
drug transmembrane transporter activity |
|
|
| Molecular Function |
GO:0015297 |
antiporter activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF01554 |
MatE |
1.2e-12 |
3-65 |
| no_ID |
|
| HMMPanther |
PTHR11206 |
MULTIDRUG |
1.1e-56 |
2-123 |
| HMMPanther |
PTHR11206:SF21 |
MATE |
1.1e-56 |
2-123 |
- Wolf-PSORT
Lj2g3v3070850.2 vacu 7, plas 4, extr 2, nucl_plas 2, golg_plas 2, cysk_plas 2, E.R._plas 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3070850.2 |
|