Miyakogusa Predicted Gene

Lj2g3v3069800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M725_SOYBN 1462 80.9 84.9 (tr|I1M725) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G30330.1 760 80.7 87.2 | Symbols: ARF6 | auxin response factor 6 | chr1:10686125-10690036 REVERSE LENGTH=933
Medicago Medtr2g018690.1 757 80.0 86.8 | auxin response factor 2 | HC | chr2:5912688-5906356 | 20130731
Soybean Glyma02g45100.1 1461 80.8 84.7  
LJGI gnl|LJGI|BP042557 1057 99.6 99.6 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3069800.1 length: 877 aa.
IPR003311 AUX/IAA protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02309 AUX_IAA 7.2e-19 734-832
IPR003340 B3 DNA binding domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 2.8e-21 129-230
HMMSmart SM01019 B3 3.9e-24 129-231
ProfileScan PS50863 B3 12.548 129-231
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 5.3e-35 255-338
IPR011525 Aux/IAA-ARF-dimerisation
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 25.128 742-826
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 1.3e-40 122-244
superfamily SSF101936 DNA-binding 5.9e-54 112-259
no_ID  
HMMPanther PTHR31384 FAMILY 1.1e-246 13-870
Seg seg seg NA 253-259
400-415
459-470
508-516
525-541
superfamily SSF54277 CAD 2.2e-08 729-829
Wolf-PSORT
Lj2g3v3069800.1	nucl 12, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3069800.1