Miyakogusa Predicted Gene

Lj2g3v3059750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M731_SOYBN 783 83.0 89.9 (tr|I1M731) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G22330.1 665 66.9 81.2 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Medicago Medtr5g090120.1 763 81.2 88.1 | DEAD-box ATP-dependent RNA helicase-like protein | HC | chr5:39247084-39252313 | 20130731
Soybean Glyma14g03760.1 783 83.0 89.9  
LJGI gnl|LJGI|TC60837 1526 99.9 99.9 similar to UniRef100_Q9LUW6 Cluster: DEAD-box ATP-dependent RNA helicase 9; n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA helicase 9 - Arabidopsis thaliana (Mouse-ear cress), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3059750.1 length: 580 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 4.4e-26 346-418
HMMSmart SM00490 helicase 4.9e-33 338-418
ProfileScan PS51194 HELICASE_CTER 23.724 313-457
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1.6e-44 104-272
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 2.2e-57 98-301
ProfileScan PS51192 HELICASE_ATP_BIND_1 32.943 110-284
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 8.794 79-107
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.4e-74 152-441
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.8e-50 73-284
285-450
HMMPanther PTHR24031 FAMILY 2.8e-226 68-556
HMMPanther PTHR24031:SF107HELICASE CONSERVED 2.8e-226 68-556
Seg seg seg NA 461-526
531-579
Wolf-PSORT
Lj2g3v3059750.1	chlo 10, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3059750.1