Miyakogusa Predicted Gene

Lj2g3v3058520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SSE0_LOTJA 132 44.2 63.5 (tr|I3SSE0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G25700.1 59.3 32.2 51.0 | Symbols: ASK3, SK3 | SKP1-like 3 | chr2:10948914-10949551 REVERSE LENGTH=163
Medicago Medtr4g033460.1 60.5 34.7 55.9 | SCF ubiquitin ligase, SKP1 component | LC | chr4:11932971-11931829 | 20130731
Soybean Glyma16g23230.1 65.1 32.1 54.0  
LJGI gnl|LJGI|TC67337 1253 95.2 95.2 similar to UniRef100_Q5YLQ7 Cluster: Ethylene-responsive element binding factor; n=1; Gossypium hirsutum|Rep: Ethylene-responsive element binding factor - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3058520.1 length: 352 aa.
IPR001232 SKP1 component
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMSmart SM00512 Found 0.00023 190-298
IPR004883 Lateral organ boundaries, LOB
HMMPfam PF03195 DUF260 3.2e-07 8-55
ProfileScan PS50891 LOB 8.928 7-115
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 1.8e-16 191-324
superfamily SSF54695 POZ 1.6e-08 191-253
IPR016073 SKP1 component, POZ
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF03931 Skp1_POZ 4.1e-08 193-249
Wolf-PSORT
Lj2g3v3058520.1	nucl 6.5, cyto_nucl 4, mito 2.5, plas 2.5, cyto_mito 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3058520.1