Miyakogusa Predicted Gene
- Lj2g3v3034030.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K5P2_SOYBN |
249 |
88.6 |
95.5 |
(tr|I1K5P2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G23220.1 |
193 |
71.2 |
80.3 |
| Symbols: | Dynein light chain type 1 family protein | chr1:8242614-8244136 FORWARD LENGTH=129 |
| Medicago |
Medtr8g104900.1 |
230 |
81.1 |
88.6 |
| dynein light chain type 1 family protein | HC | chr8:44226350-44232514 | 20130731 |
| Soybean |
Glyma05g34910.1 |
249 |
88.6 |
95.5 |
|
| LJGI |
gnl|LJGI|TC68141 |
803 |
100.0 |
100.0 |
similar to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3034030.1 |
length: 133 aa. |
| IPR001372 |
Dynein light chain, type 1/2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005875 |
microtubule associated complex |
|
|
| Biological Process |
GO:0007017 |
microtubule-based process |
|
|
| Gene3D |
G3DSA:3.30.740.10 |
no description |
7.9e-28 |
37-125 |
| HMMPanther |
PTHR11886 |
DYNEIN |
1.9e-57 |
3-126 |
| HMMPfam |
PF01221 |
Dynein_light |
2e-28 |
36-125 |
| superfamily |
SSF54648 |
DLC |
2.7e-27 |
29-126 |
| no_ID |
|
| HMMPanther |
PTHR11886:SF9 |
CYTOPLASMIC |
1.9e-57 |
3-126 |
- Wolf-PSORT
Lj2g3v3034030.1 nucl 7, cyto 2, mito 2, chlo 1, plas 1, extr 1, cyto_mito 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3034030.1 |
|