Miyakogusa Predicted Gene

Lj2g3v3022970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL E9KID2_MEDTR 600 80.6 86.1 (tr|E9KID2) Root determined nodulation 1 OS=Medicago truncatula GN=RDN1 PE=2 SV=1
TAIR_pep AT5G13500.3 486 65.6 77.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:4338676-4340827 FORWARD LENGTH=358
Medicago Medtr5g089520.1 589 80.6 85.9 | NOD3, putative | HC | chr5:38918246-38911596 | 20130731
Soybean Glyma14g03930.1 559 75.1 83.4  
LJGI gnl|LJGI|FS359103 876 100.0 100.0 homologue to UniRef100_A7PR07 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3022970.1 length: 361 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR31485 FAMILY 5.7e-222 2-359
HMMPanther PTHR31485:SF0 SUBFAMILY 5.7e-222 2-359
Seg seg seg NA 13-20
321-335
Wolf-PSORT
Lj2g3v3022970.1	vacu 5, extr 3, mito 2, E.R. 2, cyto 1, golg 1, chlo_mito 1, cyto_mito 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3022970.1 Not targeted -21.725 0 -0.222 15.39% -21.503