Miyakogusa Predicted Gene

Lj2g3v3022830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7DX11_LOTJA 423 75.1 75.4 (tr|A7DX11) Parvulin-type peptidyl prolyl cis/trans isomerase OS=Lotus japonicus GN=pin3 PE=2 SV=1
TAIR_pep AT5G19370.1 283 63.5 77.9 | Symbols: | rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein | chr5:6524247-6526629 REVERSE LENGTH=299
Medicago Medtr5g089330.1 360 75.5 80.8 | parvulin-type peptidyl prolyl cis/trans isomerase | LC | chr5:38822974-38812230 | 20130731
Soybean Glyma14g04000.1 360 81.7 88.5  
LJGI gnl|LJGI|TC67997 1451 100.0 100.0 UniRef100_A7DX11 Cluster: Parvulin-type peptidyl prolyl cis/trans isomerase; n=1; Lotus japonicus|Rep: Parvulin-type peptidyl prolyl cis/trans isomerase - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3022830.1 length: 289 aa.
IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type
method AccNumber shortName E-value location
Molecular Function GO:0016853 isomerase activity    
HMMPfam PF00639 Rotamase 3.7e-17 89-170
ProfileScan PS50198 PPIC_PPIASE_2 21.042 81-171
IPR001763 Rhodanese-like domain
Gene3D G3DSA:3.40.250.10 no description 3.1e-24 179-288
HMMPfam PF00581 Rhodanese 5.7e-09 195-279
HMMSmart SM00450 Rhodanese 7.1e-16 181-284
ProfileScan PS50206 RHODANESE_3 16.960 195-287
superfamily SSF52821 Rhodanese/Cell 5.1e-24 156-287
no_ID  
Gene3D G3DSA:3.10.50.40 no description 1.4e-27 79-177
HMMPanther PTHR10657 PEPTIDYL-PROLYL 2.2e-140 82-289
HMMPanther PTHR10657:SF5 SUBFAMILY 2.2e-140 82-289
Seg seg seg NA 17-40
44-59
66-80
89-104
superfamily SSF54534 FKBP-like 1.6e-23 81-173
Wolf-PSORT
Lj2g3v3022830.1	mito 7.5, chlo_mito 5.5, nucl 4, chlo 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3022830.1