Miyakogusa Predicted Gene
- Lj2g3v3007500.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KCS4_MEDTR |
838 |
71.6 |
80.8 |
(tr|G7KCS4) Nuclear control of ATPase protein OS=Medicago truncatula GN=MTR_5g088780 PE=4 SV=1 |
| TAIR_pep |
AT5G12290.1 |
657 |
56.2 |
75.3 |
| Symbols: DGS1 | dgd1 suppressor 1 | chr5:3974374-3978066 REVERSE LENGTH=602 |
| Medicago |
Medtr5g088780.1 |
838 |
71.6 |
80.8 |
| ATP synthase regulation protein NCA2 | HC | chr5:38561571-38571851 | 20130731 |
| Soybean |
Glyma02g44530.2 |
791 |
69.3 |
80.9 |
|
| LJGI |
gnl|LJGI|TC60097 |
1604 |
99.3 |
99.3 |
weakly similar to UniRef100_A7R7M3 Cluster: Chromosome undetermined scaffold_1865, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1865, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3007500.1 |
length: 584 aa. |
| IPR013946 |
Nuclear control of ATP synthase 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08637 |
NCA2 |
1e-59 |
296-574 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
424-445 |
| Seg |
seg |
seg |
NA |
449-464 |
- Wolf-PSORT
Lj2g3v3007500.1 nucl 4.5, chlo 4, cysk_nucl 3, cyto 1, mito 1, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3007500.1 |
|