Miyakogusa Predicted Gene

Lj2g3v2948500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JIP4_SOYBN 885 79.5 83.8 (tr|I1JIP4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G76490.1 790 72.6 83.0 | Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642
Medicago Medtr5g087550.1 832 75.3 81.5 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like protein | HC | chr5:37947371-37951328 | 20130731
Soybean Glyma02g44070.1 885 79.5 83.8  
LJGI gnl|LJGI|TC59023 1562 98.7 98.7 similar to UniRef100_Q1HB06 Cluster: 3-hydroxy-3-methylglutaryl-coenzyme A reductase; n=1; Litchi chinensis|Rep: 3-hydroxy-3-methylglutaryl-coenzyme A reductase - Litchi chinensis (Lychee), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2948500.1 length: 544 aa.
IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II
method AccNumber shortName E-value location
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00071 HMGCOARDTASE 7.2e-87 189-210
216-236
307-325
347-372
398-424
452-473
HMMPanther PTHR10572 3-HYDROXY-3-METHYLGLUTARYL-COENZYME 2.9e-291 38-538
HMMPfam PF00368 HMG-CoA_red 6.1e-161 155-533
ProfileScan PS50065 HMG_COA_REDUCTASE_4 141.359 129-533
IPR004554 Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0050661 NADP binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00533 HMG_CoA_R_NADP: 1.3e-159 129-533
IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.70.420 no description 4.8e-54 250-365
superfamily SSF55035 NAD-binding 3.6e-47 250-366
IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF56542 Substrate-binding 4e-102 106-523
IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.90.770.10 no description 2.3e-91 366-535
IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00066 HMG_COA_REDUCTASE_1 NA 309-323
PatternScan PS00318 HMG_COA_REDUCTASE_2 NA 464-471
PatternScan PS01192 HMG_COA_REDUCTASE_3 NA 518-531
IPR023282 Hydroxymethylglutaryl-CoA reductase, N-terminal
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.10.3270.10 no description 1.9e-26 128-199
no_ID  
Seg seg seg NA 112-131
400-411
499-513
Wolf-PSORT
Lj2g3v2948500.1	E.R. 7, plas 5, extr 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2948500.1