Miyakogusa Predicted Gene
- Lj2g3v2925130.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NDG8_SOYBN |
234 |
66.5 |
77.7 |
(tr|I1NDG8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G38260.1 |
134 |
37.1 |
56.3 |
| Symbols: | Protein of unknown function (DUF833) | chr4:17937077-17938210 REVERSE LENGTH=275 |
| Medicago |
Medtr4g083440.1 |
226 |
61.2 |
72.3 |
| ser/thr-rich protein T10 in DGCR region-like protein | HC | chr4:32470418-32471984 | 20130731 |
| Soybean |
Glyma20g02900.1 |
234 |
66.5 |
77.7 |
|
| LJGI |
gnl|LJGI|TC79575 |
329 |
100.0 |
100.0 |
weakly similar to UniRef100_A7P8R2 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2925130.1 |
length: 196 aa. |
| IPR008551 |
Protein of unknown function DUF833 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR17985 |
SER/THR-RICH |
1.1e-25 |
46-196 |
| HMMPfam |
PF05742 |
NRDE |
1.9e-16 |
31-184 |
| no_ID |
|
| HMMPanther |
PTHR17985:SF8 |
SUBFAMILY |
1.1e-25 |
46-196 |
- Wolf-PSORT
Lj2g3v2925130.1 chlo 8.5, chlo_mito 5.5, nucl 3, mito 1.5, cyto_nucl 1.5, cysk_nucl 1.5, nucl_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2925130.1 |
|