Miyakogusa Predicted Gene

Lj2g3v2904860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B0BLA6_LOTJA 1156 76.8 79.8 (tr|B0BLA6) CM0545.400.nc protein OS=Lotus japonicus GN=CM0545.400.nc PE=4 SV=1
TAIR_pep AT1G45616.1 479 35.3 48.7 | Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994
Medicago Medtr5g087320.1 1150 61.8 71.8 | receptor-like protein | LC | chr5:37825611-37822549 | 20130731
Soybean Glyma14g04640.1 943 55.9 64.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2904860.1 length: 1006 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.43 136-158
239-261
453-474
ProfileScan PS51450 LRR 5.933 111-132
136-159
239-262
311-333
359-381
383-405
407-429
431-453
454-475
477-498
552-574
528-550
650-672
698-719
838-861
862-885
886-907
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 18 109-132
134-158
237-258
309-332
357-381
405-429
451-475
550-573
648-672
860-884
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 2.1e-11 31-80
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.6e-07 310-347
527-563
no_ID  
FPrintScan PR00019 LEURICHRPT 5.8e-05 432-445
550-563
Gene3D G3DSA:3.80.10.10 no description 6.5e-28 62-198
199-438
439-504
526-781
814-927
HMMPanther PTHR24420 FAMILY 1.4e-154 90-1006
HMMPanther PTHR24420:SF480SUBFAMILY NOT 1.4e-154 90-1006
HMMPfam PF13855 LRR_8 3.5e-07 677-732
816-873
HMMSmart SM00365 Leucine-rich 55 309-335
381-407
429-451
475-502
550-584
720-745
860-889
Seg seg seg NA 5-22
204-221
360-370
405-419
428-437
503-515
879-895
996-1006
superfamily SSF52047 RNI-like 2.2e-35 267-593
65-327
superfamily SSF52058 L 2.7e-67 576-930
Wolf-PSORT
Lj2g3v2904860.1	chlo 7, extr 3, nucl 2, cyto 1, E.R. 1, cysk_nucl 1, nucl_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2904860.1