Miyakogusa Predicted Gene

Lj2g3v2878360.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SY67_LOTJA 379 82.5 82.5 (tr|I3SY67) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G05530.1 273 60.4 71.4 | Symbols: IBR1, SDRA | indole-3-butyric acid response 1 | chr4:2816462-2818074 FORWARD LENGTH=254
Medicago Medtr4g132850.1 341 73.2 79.4 | short-chain dehydrogenase/reductase | HC | chr4:55568103-55570446 | 20130731
Soybean Glyma17g01300.1 345 73.7 79.4  
LJGI gnl|LJGI|TC58820 1356 100.0 100.0 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined scaffold_332, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_332, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2878360.1 length: 228 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 7.9e-07 85-96
137-145
157-176
IPR002347 Glucose/ribitol dehydrogenase
FPrintScan PR00081 GDHRDH 6.6e-32 11-28
85-96
131-147
157-176
177-194
212-228
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 9.5e-66 4-228
IPR020904 Short-chain dehydrogenase/reductase, conserved site
Molecular Function GO:0016491 oxidoreductase activity    
PatternScan PS00061 ADH_SHORT NA 144-172
IPR027052 Dehydrogenase/reductase SDR member 2/4
Molecular Function GO:0016491 oxidoreductase activity    
HMMPanther PTHR24322:SF21 SUBFAMILY 4.3e-112 1-228
no_ID  
HMMPanther PTHR24322 FAMILY 4.3e-112 1-228
HMMPfam PF13561 adh_short_C2 2.2e-33 17-228
Seg seg seg NA 88-102
137-145
160-173
superfamily SSF51735 NAD(P)-binding 9.2e-63 5-228
Wolf-PSORT
Lj2g3v2878360.1	cyto 9, plas 3, mito 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2878360.1