Miyakogusa Predicted Gene
- Lj2g3v2878300.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3TAP9_LOTJA |
433 |
86.9 |
87.3 |
(tr|I3TAP9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G22300.1 |
351 |
80.4 |
88.7 |
| Symbols: SOBER1 | carboxylesterases | chr4:11787560-11789252 REVERSE LENGTH=262 |
| Medicago |
Medtr4g132890.1 |
392 |
90.8 |
95.7 |
| acyl-protein thioesterase, putative | HC | chr4:55599988-55595752 | 20130731 |
| Soybean |
Glyma17g01270.1 |
399 |
79.0 |
82.5 |
|
| LJGI |
gnl|LJGI|TC62791 |
1398 |
97.5 |
97.5 |
similar to UniRef100_A7R103 Cluster: Chromosome undetermined scaffold_332, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_332, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2878300.1 |
length: 252 aa. |
| IPR003140 |
Phospholipase/carboxylesterase/thioesterase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF02230 |
Abhydrolase_2 |
3e-49 |
41-246 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
1.6e-64 |
42-247 |
| HMMPanther |
PTHR10655 |
LYSOPHOSPHOLIPASE-RELATED |
2.7e-81 |
44-247 |
| HMMPanther |
PTHR10655:SF6 |
ACYL-PROTEIN |
2.7e-81 |
44-247 |
| Seg |
seg |
seg |
NA |
14-45 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
6.5e-37 |
44-250 |
- Wolf-PSORT
Lj2g3v2878300.1 chlo 10, nucl 2, vacu 1, golg 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2878300.1 |
|