Miyakogusa Predicted Gene
- Lj2g3v2878260.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JKI1_MEDTR |
457 |
83.9 |
88.2 |
(tr|G7JKI1) Alkaline ceramidase OS=Medicago truncatula GN=MTR_4g133000 PE=4 SV=1 |
| TAIR_pep |
AT4G22330.1 |
409 |
74.9 |
83.5 |
| Symbols: ATCES1 | Alkaline phytoceramidase (aPHC) | chr4:11798483-11799549 FORWARD LENGTH=255 |
| Medicago |
Medtr4g133000.3 |
457 |
83.9 |
88.2 |
| alkaline phytoceramidase | HC | chr4:55643715-55648105 | 20130731 |
| Soybean |
Glyma07g39500.1 |
447 |
83.9 |
89.8 |
|
| LJGI |
gnl|LJGI|TC62445 |
1522 |
100.0 |
100.0 |
similar to UniRef100_Q2HVG4 Cluster: Alkaline phytoceramidase; n=2; Medicago truncatula|Rep: Alkaline phytoceramidase - Medicago truncatula (Barrel medic), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2878260.1 |
length: 255 aa. |
| IPR008901 |
Ceramidase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006672 |
ceramide metabolic process |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0016811 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
|
|
| HMMPfam |
PF05875 |
Ceramidase |
6e-55 |
7-248 |
| no_ID |
|
| HMMPanther |
PTHR12956 |
ALKALINE |
9.1e-58 |
5-253 |
| Seg |
seg |
seg |
NA |
42-53 |
- Wolf-PSORT
Lj2g3v2878260.1 cyto 10, nucl 2, mito 1, E.R. 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2878260.1 |
|