Miyakogusa Predicted Gene

Lj2g3v2877220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KH86_MEDTR 223 78.8 81.8 (tr|G7KH86) Zinc finger CCCH domain-containing protein OS=Medicago truncatula GN=MTR_5g085200 PE=4 SV=1
TAIR_pep AT1G04990.1 162 65.3 74.6 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:1419368-1421454 REVERSE LENGTH=404
Medicago Medtr5g085200.1 223 78.8 81.8 | zinc finger CCCH domain protein | HC | chr5:36776743-36772884 | 20130731
Soybean Glyma02g43510.1 220 78.1 82.5  
LJGI gnl|LJGI|TC69939 785 99.0 99.0 similar to UniRef100_A7PXA0 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2877220.1 length: 138 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00049 99-118
HMMPfam PF00642 zf-CCCH 2.5e-08 50-75
99-118
HMMSmart SM00356 zinc 0.071 49-76
91-118
ProfileScan PS50103 ZF_C3H1 11.544 49-77
91-119
no_ID  
HMMPanther PTHR12506 PROTEIN 1.2e-43 37-138
HMMPanther PTHR12506:SF11 ZINC 1.2e-43 37-138
Seg seg seg NA 10-21
superfamily SSF90229 CCCH 0.00031 44-77
99-125
Wolf-PSORT
Lj2g3v2877220.1	pero 6, nucl 3, cyto_pero 3, chlo 2, mito 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2877220.1