| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7M511_SOYBN | 1336 | 77.2 | 85.0 | (tr|K7M511) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G55250.1 | 921 | 54.0 | 70.4 | | Symbols: HUB2 | histone mono-ubiquitination 2 | chr1:20607214-20612302 FORWARD LENGTH=900 |
| Medicago | Medtr5g085010.1 | 1244 | 71.7 | 82.3 | | E3 ubiquitin-protein ligase BRE1-like protein | HC | chr5:36680874-36657703 | 20130731 |
| Soybean | Glyma02g43490.1 | 1293 | 75.6 | 83.7 | |
| LJGI | gnl|LJGI|TC71711 | 870 | 100.0 | 100.0 | weakly similar to UniRef100_A7P033 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%) |
| Lj2g3v2876160.2 | length: 871 aa. | |||
| IPR001841 | Zinc finger, RING-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00184 | Ring | 2.9e-05 | 819-857 |
| ProfileScan | PS50089 | ZF_RING_2 | 11.102 | 819-857 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 3.4e-12 | 806-867 |
| IPR017907 | Zinc finger, RING-type, conserved site | |||
| PatternScan | PS00518 | ZF_RING_1 | NA | 834-843 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 38-73 205-233 240-268 319-347 397-439 504-539 574-616 679-707 749-817 |
| HMMPanther | PTHR23163 | RING | 4.2e-118 | 30-871 |
| HMMPanther | PTHR23163:SF0 | SUBFAMILY | 4.2e-118 | 30-871 |
| HMMPfam | PF13920 | zf-C3HC4_3 | 5.2e-08 | 818-859 |
| Seg | seg | seg | NA | 33-48 575-583 |
| superfamily | SSF57850 | RING/U-box | 3e-12 | 773-864 |
Lj2g3v2876160.2 nucl 7, cyto 7, cyto_nucl 7
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v2876160.2 | Not targeted | -10.923 | -0.030 | -5.030 | 4.26% | -5.863 |