Miyakogusa Predicted Gene
- Lj2g3v2856020.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M7K2_SOYBN |
588 |
79.9 |
88.1 |
(tr|I1M7K2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G04530.1 |
494 |
68.1 |
81.6 |
| Symbols: CPZ, TRZ2 | Metallo-hydrolase/oxidoreductase superfamily protein | chr2:1576808-1578611 FORWARD LENGTH=354 |
| Medicago |
Medtr5g084700.1 |
587 |
80.9 |
87.7 |
| nuclear ribonuclease Z | HC | chr5:36544186-36548259 | 20130731 |
| Soybean |
Glyma14g05580.1 |
588 |
79.9 |
88.1 |
|
| LJGI |
gnl|LJGI|TC73553 |
2038 |
98.9 |
98.9 |
similar to UniRef100_A7PXC1 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2856020.1 |
length: 351 aa. |
| IPR001279 |
Beta-lactamase-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| Gene3D |
G3DSA:3.60.15.10 |
no description |
4.4e-39 |
114-332 |
| no_ID |
|
| HMMPanther |
PTHR12553 |
RIBONUCLEASE |
6e-105 |
92-331 |
| HMMPanther |
PTHR12553:SF4 |
RIBONUCLEASE |
6e-105 |
92-331 |
| HMMPfam |
PF12706 |
Lactamase_B_2 |
9.2e-19 |
112-315 |
| Seg |
seg |
seg |
NA |
326-338 |
| superfamily |
SSF56281 |
Metallo-hydrolase/oxidoreductase |
1.7e-37 |
80-332 |
- Wolf-PSORT
Lj2g3v2856020.1 cyto 8, nucl 2, chlo 1, mito 1, pero 1, golg 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2856020.1 |
|