database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1MYZ5_SOYBN | 946 | 86.1 | 91.1 | (tr|I1MYZ5) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
TAIR_pep | AT5G05450.1 | 803 | 73.5 | 87.0 | | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:1612077-1615195 FORWARD LENGTH=593 |
Medicago | Medtr3g071620.1 | 961 | 88.5 | 95.9 | | DEAD-box ATP-dependent RNA helicase-like protein | HC | chr3:32167186-32161537 | 20130731 |
Soybean | Glyma18g02760.1 | 946 | 86.1 | 91.1 | |
LJGI | gnl|LJGI|AW719523 | 1049 | 100.0 | 100.0 | similar to UniRef100_Q0WRR0 Cluster: ATP-dependent RNA helicase-like protein; n=1; Arabidopsis thaliana|Rep: ATP-dependent RNA helicase-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (31%) |
Lj2g3v2827810.1 | length: 539 aa. | |||
IPR000629 | RNA helicase, ATP-dependent, DEAD-box, conserved site | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0005524 | ATP binding | ||
Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
PatternScan | PS00039 | DEAD_ATP_HELICASE | NA | 171-179 |
IPR001650 | Helicase, C-terminal | |||
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0004386 | helicase activity | ||
Molecular Function | GO:0005524 | ATP binding | ||
HMMPfam | PF00271 | Helicase_C | 1.9e-21 | 304-376 |
HMMSmart | SM00490 | helicase | 2.4e-25 | 295-376 |
ProfileScan | PS51194 | HELICASE_CTER | 18.645 | 267-423 |
IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | |||
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0005524 | ATP binding | ||
Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
HMMPfam | PF00270 | DEAD | 5.6e-42 | 40-214 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
HMMSmart | SM00487 | DEAD-like | 2.2e-47 | 35-241 |
ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 28.522 | 47-225 |
IPR014014 | RNA helicase, DEAD-box type, Q motif | |||
ProfileScan | PS51195 | Q_MOTIF | 8.802 | 16-44 |
IPR025313 | Domain of unknown function DUF4217 | |||
HMMPfam | PF13959 | DUF4217 | 6.5e-20 | 415-476 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
superfamily | SSF52540 | P-loop | 2.2e-61 | 88-397 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 504-525 |
Gene3D | G3DSA:3.40.50.300 | no description | 3.3e-38 | 12-232 236-397 |
HMMPanther | PTHR24031 | FAMILY | 8.5e-252 | 13-524 |
HMMPanther | PTHR24031:SF2 | SUBFAMILY | 8.5e-252 | 13-524 |
Seg | seg | seg | NA | 517-529 |
Lj2g3v2827810.1 cyto 6, nucl 5, chlo 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj2g3v2827810.1 |