| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | E4NKF8_MEDTR | 1022 | 74.5 | 81.5 | (tr|E4NKF8) E3 ubiquitin ligase OS=Medicago truncatula GN=PUB1 PE=2 SV=1 |
| TAIR_pep | AT3G46510.1 | 372 | 37.8 | 57.4 | | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17124106-17126539 REVERSE LENGTH=660 |
| Medicago | Medtr5g083030.1 | 1022 | 74.5 | 81.5 | | ubiquitin-protein ligase, PUB17 | HC | chr5:35819773-35821937 | 20130731 |
| Soybean | Glyma02g43190.1 | 1016 | 76.1 | 82.6 | |
| LJGI | gnl|LJGI|TC71173 | 523 | 100.0 | 100.0 | similar to UniRef100_A7Q3L5 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%) |
| Lj2g3v2794440.1 | length: 687 aa. | |||
| IPR000225 | Armadillo | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00514 | Arm | 0.00011 | 430-466 553-588 |
| HMMSmart | SM00185 | Armadillo/beta-catenin-like | 68 | 427-467 513-551 552-592 593-634 |
| ProfileScan | PS50176 | ARM_REPEAT | 9.432 | 438-480 522-564 |
| IPR003613 | U box domain | |||
| Cellular Component | GO:0000151 | ubiquitin ligase complex | ||
| Molecular Function | GO:0004842 | ubiquitin-protein ligase activity | ||
| Biological Process | GO:0016567 | protein ubiquitination | ||
| HMMPfam | PF04564 | U-box | 4.4e-22 | 285-355 |
| HMMSmart | SM00504 | Modified | 2.8e-32 | 288-351 |
| IPR011989 | Armadillo-like helical | |||
| Gene3D | G3DSA:1.25.10.10 | no description | 5.8e-49 | 336-680 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 3.2e-16 | 286-335 |
| IPR016024 | Armadillo-type fold | |||
| Molecular Function | GO:0005488 | binding | ||
| superfamily | SSF48371 | ARM | 4.5e-40 | 397-676 |
| no_ID | ||||
| HMMPanther | PTHR23315 | BETA | 3.5e-99 | 19-677 |
| HMMPanther | PTHR23315:SF7 | ANKYRIN-REPEAT-ARM | 3.5e-99 | 19-677 |
| Seg | seg | seg | NA | 272-280 364-377 628-639 663-678 |
| superfamily | SSF57850 | RING/U-box | 2.4e-29 | 267-364 |
Lj2g3v2794440.1 chlo 8, nucl 2, cyto 2, vacu 2, cyto_nucl 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v2794440.1 |