Miyakogusa Predicted Gene

Lj2g3v2771110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JIA0_SOYBN 1638 92.3 94.4 (tr|I1JIA0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G11130.1 1568 87.5 92.4 | Symbols: | Clathrin, heavy chain | chr3:3482575-3491667 REVERSE LENGTH=1705
Medicago Medtr3g070940.1 1625 91.6 94.2 | clathrin heavy chain | HC | chr3:31838485-31851792 | 20130731
Soybean Glyma02g42560.1 1642 92.2 94.3  
LJGI gnl|LJGI|TC58548 1635 100.0 100.0 homologue to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1; Glycine max|Rep: Clathrin heavy chain - Glycine max (Soybean), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2771110.1 length: 872 aa.
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
HMMPfam PF00637 Clathrin 9.2e-21 556-693
702-842
HMMSmart SM00299 Clathrin 1.6e-39 552-694
701-843
IPR001473 Clathrin, heavy chain, propeller, N-terminal
Molecular Function GO:0005198 structural molecule activity    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030130 clathrin coat of trans-Golgi network vesicle    
Cellular Component GO:0030132 clathrin coat of coated pit    
superfamily SSF50989 Clathrin 9.8e-129 5-344
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.9e-19 713-867
IPR015348 Clathrin, heavy chain, linker, core motif
Molecular Function GO:0005198 structural molecule activity    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030130 clathrin coat of trans-Golgi network vesicle    
Cellular Component GO:0030132 clathrin coat of coated pit    
HMMPfam PF09268 Clathrin-link 3.2e-09 345-368
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.2e-58 458-794
345-501
IPR016025 Clathrin, heavy chain, linker/propeller domain
Molecular Function GO:0005198 structural molecule activity    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030130 clathrin coat of trans-Golgi network vesicle    
Cellular Component GO:0030132 clathrin coat of coated pit    
Gene3D G3DSA:2.130.10.110 no description 1.2e-153 5-377
IPR022365 Clathrin, heavy chain, propeller repeat
HMMPfam PF01394 Clathrin_propel 9.4e-09 21-56
155-198
no_ID  
HMMPanther PTHR10292 CLATHRIN 0 4-867
HMMPanther PTHR10292:SF1 CLATHRIN 0 4-867
HMMPfam PF13838 Clathrin_H_link 4.4e-29 370-435
Seg seg seg NA 2-10
262-277
725-737
854-863
Wolf-PSORT
Lj2g3v2771110.1	chlo 6, cyto 5, extr 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2771110.1