Miyakogusa Predicted Gene

Lj2g3v2660400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JL95_MEDTR 953 74.7 80.2 (tr|G7JL95) DEM2 OS=Medicago truncatula GN=MTR_4g086240 PE=4 SV=1
TAIR_pep AT3G19240.1 831 68.9 77.9 | Symbols: | Vacuolar import/degradation, Vid27-related protein | chr3:6664383-6666423 FORWARD LENGTH=648
Medicago Medtr4g086240.1 953 74.7 80.2 | vacuolar import/degradation, VID27-like protein | HC | chr4:33764040-33760228 | 20130731
Soybean Glyma07g33490.1 946 75.4 79.5  
LJGI gnl|LJGI|TC61945 1187 97.0 97.0 similar to UniRef100_Q6VVW7 Cluster: DEM2; n=1; Solanum lycopersicum|Rep: DEM2 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2660400.1 length: 631 aa.
IPR013863 Vacuolar import/degradation, Vid27-related
method AccNumber shortName E-value location
HMMPfam PF08553 VID27 3.1e-44 21-572
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.4e-07 376-484
no_ID  
HMMPanther PTHR31913 FAMILY 2.6e-30 234-627
Seg seg seg NA 14-29
53-65
106-119
221-230
426-437
488-501
superfamily SSF101908 Putative 1.5e-12 329-562
Wolf-PSORT
Lj2g3v2660400.1	nucl 9, pero 2, chlo 1, cyto 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2660400.1