Miyakogusa Predicted Gene

Lj2g3v2599890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL M0SSE2_MUSAM 155 56.7 65.9 (tr|M0SSE2) Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
TAIR_pep AT5G03340.1 152 56.1 65.9 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5:810091-813133 REVERSE LENGTH=810
Medicago Medtr1g063380.1 153 56.1 65.9 | ATPase, AAA-type, CDC48 protein | HC | chr1:27975315-27979980 | 20130731
Soybean Glyma13g39830.1 152 56.1 65.9  
LJGI gnl|LJGI|TC71647 73.8 97.6 97.6 weakly similar to UniRef100_Q5CKA3 Cluster: Cell division cycle protein 48; n=1; Cryptosporidium hominis|Rep: Cell division cycle protein 48 - Cryptosporidium hominis, partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2599890.1 length: 146 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 5.8e-06 20-143
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.9e-21 24-140
IPR005938 ATPase, AAA-type, CDC48
Molecular Function GO:0016787 hydrolase activity    
HMMPanther PTHR23077:SF18 CELL 8.9e-43 1-146
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1e-19 1-145
no_ID  
Gene3D G3DSA:3.40.50.300 no description 6.5e-29 2-138
HMMPanther PTHR23077 AAA-FAMILY 8.9e-43 1-146
Wolf-PSORT
Lj2g3v2599890.1	cyto 10, cysk 2, nucl 1, E.R. 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2599890.1