Miyakogusa Predicted Gene

Lj2g3v2540620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KG16_MEDTR 1080 75.5 82.6 (tr|G7KG16) PHD finger protein OS=Medicago truncatula GN=MTR_5g077750 PE=4 SV=1
TAIR_pep AT1G66170.1 687 52.7 66.8 | Symbols: MMD1 | RING/FYVE/PHD zinc finger superfamily protein | chr1:24638793-24641222 REVERSE LENGTH=704
Medicago Medtr5g077750.1 1079 75.5 82.6 | PHD finger protein MALE meiocyte DEATH protein | HC | chr5:33185832-33182972 | 20130731
Soybean Glyma14g39310.1 1021 75.1 83.6  
LJGI gnl|LJGI|TC74204 54.0 85.7 85.7 similar to UniRef100_A7QR23 Cluster: Chromosome undetermined scaffold_147, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_147, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2540620.1 length: 688 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 3.7e-05 606-652
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 4e-12 593-660
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.6e-13 598-654
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 607-651
no_ID  
HMMPanther PTHR16286 MIXED-LINEAGE 2.5e-171 135-653
HMMPanther PTHR16286:SF7 MMD1 2.5e-171 135-653
Seg seg seg NA 289-304
Wolf-PSORT
Lj2g3v2540620.1	nucl 4, cyto 4, cyto_nucl 4, chlo 3, mito 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2540620.1