Miyakogusa Predicted Gene

Lj2g3v2538590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KYE8_SOYBN 345 66.3 72.2 (tr|I1KYE8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G22360.1 190 63.4 74.5 | Symbols: | SWIB complex BAF60b domain-containing protein | chr4:11807811-11809660 FORWARD LENGTH=385
Medicago Medtr3g055330.2 354 61.8 68.6 | SWIB/MDM2 domain protein | HC | chr3:21756054-21752893 | 20130731
Soybean Glyma08g43590.2 345 66.3 72.2  
LJGI gnl|LJGI|TC58803 722 99.5 99.5 similar to UniRef100_A7QZX7 Cluster: Chromosome undetermined scaffold_292, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_292, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2538590.1 length: 330 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02201 SWIB 4.6e-27 153-227
superfamily SSF47592 SWIB/MDM2 1.3e-27 143-237
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1e-05 4-61
IPR014876 DEK, C-terminal
HMMPfam PF08766 DEK_C 5e-08 4-59
IPR019835 SWIB domain
HMMSmart SM00151 SWI 1.3e-42 152-231
no_ID  
Gene3D G3DSA:1.10.245.10 no description 9.6e-32 144-233
HMMPanther PTHR13844 BRG-1 1.7e-44 144-231
HMMPanther PTHR13844:SF0 SUBFAMILY 1.7e-44 144-231
Seg seg seg NA 61-79
107-135
Wolf-PSORT
Lj2g3v2538590.1	nucl 11, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2538590.1