Miyakogusa Predicted Gene

Lj2g3v2535450.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7KFX1_MEDTR 198 52.7 62.3 (tr|G7KFX1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g077280 PE=4 SV=1

TAIR_pep AT5G16550.1 102 34.7 50.3 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5405526-5406641 FORWARD LENGTH=249

Medicago Medtr5g077280.1 198 52.7 62.3 | transmembrane protein, putative | HC | chr5:32998460-32994709 | 20130731

Soybean Glyma02g40940.1 194 52.0 61.3

LJGI gnl|LJGI|TC76520 52.0 96.7 96.7 weakly similar to UniRef100_A7PZ23 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v2535450.1 length: 207 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 85-106
114-130

Wolf-PSORT

Lj2g3v2535450.1 vacu 10, golg 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v2535450.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7KFX1_MEDTR	198	52.7	62.3	(tr\|G7KFX1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g077280 PE=4 SV=1
TAIR_pep	AT5G16550.1	102	34.7	50.3	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:5405526-5406641 FORWARD LENGTH=249
Medicago	Medtr5g077280.1	198	52.7	62.3	\| transmembrane protein, putative \| HC \| chr5:32998460-32994709 \| 20130731
Soybean	Glyma02g40940.1	194	52.0	61.3
LJGI	gnl\|LJGI\|TC76520	52.0	96.7	96.7	weakly similar to UniRef100_A7PZ23 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

no_ID
Lj2g3v2535450.1				length: 207 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	85-106 114-130