Miyakogusa Predicted Gene
- Lj2g3v2522130.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S8P0_LOTJA |
333 |
92.3 |
92.3 |
(tr|I3S8P0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G31880.2 |
177 |
54.3 |
71.3 |
| Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). | chr4:15419435-15423939 REVERSE LENGTH=872 |
| Medicago |
Medtr1g014270.1 |
186 |
62.3 |
72.8 |
| lamin-B receptor of tudor domain protein | HC | chr1:3029508-3039200 | 20130731 |
| Soybean |
Glyma04g06560.2 |
197 |
63.8 |
75.5 |
|
| LJGI |
gnl|LJGI|TC76146 |
1074 |
99.8 |
99.8 |
weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2522130.2 |
length: 181 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
0.00033 |
58-173 |
| no_ID |
|
| HMMPanther |
PTHR12663 |
ANDROGEN |
1.1e-54 |
3-169 |
| HMMPanther |
PTHR12663:SF0 |
SUBFAMILY |
1.1e-54 |
3-169 |
| Seg |
seg |
seg |
NA |
144-157 |
- Wolf-PSORT
Lj2g3v2522130.2 cyto 8, chlo 2, nucl 2, extr 1, cysk 1, chlo_mito 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2522130.2 |
|