Miyakogusa Predicted Gene

Lj2g3v2507950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S087_LOTJA 414 99.5 99.5 (tr|I3S087) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G45130.1 334 78.5 88.5 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, ATRAB-F2A, RAB-F2A | RAB homolog 1 | chr5:18244495-18246060 FORWARD LENGTH=200
Medicago Medtr3g064390.1 406 96.5 99.0 | small GTPase family RAB protein | HC | chr3:28986937-28992404 | 20130731
Soybean Glyma11g33100.3 405 95.5 99.0  
LJGI gnl|LJGI|TC57678 1195 100.0 100.0 homologue to UniRef100_Q41668 Cluster: Guanine nucleotide regulatory protein; n=1; Vicia faba|Rep: Guanine nucleotide regulatory protein - Vicia faba (Broad bean), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2507950.1 length: 200 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1.1e-36 11-32
34-50
52-74
114-127
149-171
HMMPfam PF00071 Ras 3.7e-60 12-171
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 1.8e-06 16-200
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 3.6e-11 13-174
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 4.3e-82 11-174
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 7.1e-28 11-167
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 6.9e-30 8-174
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9e-59 6-199
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.5e-65 8-199
HMMPanther PTHR24073 FAMILY 2.2e-109 9-200
HMMPanther PTHR24073:SF132SUBFAMILY NOT 2.2e-109 9-200
ProfileScan PS51419 RAB 33.075 6-199
Wolf-PSORT
Lj2g3v2507950.1	chlo 11, cyto 1, mito 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2507950.1