Miyakogusa Predicted Gene

Lj2g3v2506760.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MXD2_SOYBN 974 69.1 79.8 (tr|K7MXD2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G01810.3 318 51.5 63.6 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). | chr3:289218-292557 FORWARD LENGTH=921

Medicago Medtr7g092460.4 271 50.6 68.5 | nucleolar gar2-like protein | HC | chr7:36641467-36636796 | 20130731

Soybean Glyma16g06420.1 677 63.2 72.6

LJGI gnl|LJGI|TC70176 1055 100.0 100.0 similar to UniRef100_A7PLR8 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v2506760.1 length: 697 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 443-471

HMMPanther PTHR31593 FAMILY 5.5e-49 439-682

Seg seg seg NA 221-240

Wolf-PSORT

Lj2g3v2506760.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v2506760.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MXD2_SOYBN	974	69.1	79.8	(tr\|K7MXD2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G01810.3	318	51.5	63.6	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). \| chr3:289218-292557 FORWARD LENGTH=921
Medicago	Medtr7g092460.4	271	50.6	68.5	\| nucleolar gar2-like protein \| HC \| chr7:36641467-36636796 \| 20130731
Soybean	Glyma16g06420.1	677	63.2	72.6
LJGI	gnl\|LJGI\|TC70176	1055	100.0	100.0	similar to UniRef100_A7PLR8 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

no_ID
Lj2g3v2506760.1				length: 697 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	443-471
HMMPanther	PTHR31593	FAMILY	5.5e-49	439-682
Seg	seg	seg	NA	221-240