Miyakogusa Predicted Gene
- Lj2g3v2485570.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KFP2_MEDTR |
660 |
63.3 |
76.7 |
(tr|G7KFP2) DNA-binding protein SMUBP-2 OS=Medicago truncatula GN=MTR_5g076330 PE=4 SV=1 |
| TAIR_pep |
AT1G65780.1 |
341 |
35.4 |
57.1 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:24462958-24466888 REVERSE LENGTH=1065 |
| Medicago |
Medtr5g076300.1 |
643 |
63.2 |
76.2 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr5:32517067-32511573 | 20130731 |
| Soybean |
Glyma14g38960.1 |
366 |
54.0 |
67.7 |
|
| LJGI |
gnl|LJGI|FS340242 |
1146 |
100.0 |
100.0 |
weakly similar to UniRef100_Q9SHX6 Cluster: F1E22.16; n=1; Arabidopsis thaliana|Rep: F1E22.16 - Arabidopsis thaliana (Mouse-ear cress), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2485570.1 |
length: 534 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
1.1e-13 |
254-326 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
5e-16 |
248-369 |
| HMMPanther |
PTHR10887 |
DNA2/NAM7 |
2.8e-96 |
13-518 |
| HMMPanther |
PTHR10887:SF236SUBFAMILY |
NOT |
2.8e-96 |
13-518 |
| HMMPfam |
PF13086 |
AAA_11 |
1.7e-17 |
254-403 |
- Wolf-PSORT
Lj2g3v2485570.1 nucl 4, cyto 4, cyto_nucl 4, chlo 1, mito 1, plas 1, pero 1, cysk 1, golg 1, chlo_mito 1, golg_plas 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2485570.1 |
|