Miyakogusa Predicted Gene

Lj2g3v2448200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MZN4_SOYBN 440 82.5 85.6 (tr|I1MZN4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G26910.1 396 85.9 90.9 | Symbols: RPL10B | Ribosomal protein L16p/L10e family protein | chr1:9321709-9322813 FORWARD LENGTH=221
Medicago Medtr3g094230.1 423 91.8 96.8 | 60S ribosomal protein L10-2 | HC | chr3:43068367-43071164 | 20130731
Soybean Glyma18g05700.1 440 82.5 85.6  
LJGI gnl|LJGI|TC70360 1354 99.9 99.9 homologue to UniRef100_Q3SC85 Cluster: 60S ribosomal protein L10; n=1; Solanum lycopersicum|Rep: 60S ribosomal protein L10 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2448200.1 length: 259 aa.
IPR001197 Ribosomal protein L10e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMTigr TIGR00279 L10e: 1.2e-75 41-213
IPR016180 Ribosomal protein L10e/L16
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.90.1170.10 no description 5.9e-95 43-212
HMMPfam PF00252 Ribosomal_L16 5.9e-32 44-205
superfamily SSF54686 Ribosomal 7.7e-74 43-212
IPR018255 Ribosomal protein L10e, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS01257 RIBOSOMAL_L10E NA 147-168
no_ID  
HMMPanther PTHR11726 60S 3.3e-165 39-259
HMMPanther PTHR11726:SF1 60S 3.3e-165 39-259
Seg seg seg NA 27-38
Wolf-PSORT
Lj2g3v2448200.1	mito 10.5, chlo_mito 7.5, chlo 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2448200.1