Miyakogusa Predicted Gene

Lj2g3v2379070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KAA8_SOYBN 706 75.3 83.3 (tr|K7KAA8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G30320.1 476 56.6 69.6 | Symbols: | Pseudouridine synthase family protein | chr2:12925728-12927896 REVERSE LENGTH=510
Medicago Medtr5g074620.1 669 72.0 82.3 | tRNA pseudouridine synthase | HC | chr5:31720119-31716063 | 20130731
Soybean Glyma0448s00210.1 670 72.3 81.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2379070.1 length: 498 aa.
IPR001406 Pseudouridine synthase I, TruA
method AccNumber shortName E-value location
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
HMMPanther PTHR11142 PSEUDOURIDYLATE 1.3e-70 54-492
IPR020094 Pseudouridine synthase I, TruA, N-terminal
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
Gene3D G3DSA:3.30.70.580 no description 7.5e-20 60-182
IPR020095 Pseudouridine synthase I, TruA, C-terminal
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
Gene3D G3DSA:3.30.70.660 no description 1e-26 325-408
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
HMMPfam PF01416 PseudoU_synth_1 5.5e-12 65-180
IPR020103 Pseudouridine synthase, catalytic domain
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
superfamily SSF55120 Pseudouridine 7.6e-41 57-408
no_ID  
Seg seg seg NA 19-34
37-51
257-271
287-296
Wolf-PSORT
Lj2g3v2379070.1	chlo 8.5, chlo_mito 5, nucl 3, plas 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2379070.1