Miyakogusa Predicted Gene
- Lj2g3v2364690.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IXC7_MEDTR |
362 |
67.5 |
80.2 |
(tr|G7IXC7) WRKY transcription factor OS=Medicago truncatula GN=MTR_3g036720 PE=4 SV=1 |
| TAIR_pep |
AT2G38470.1 |
80.1 |
56.7 |
73.3 |
| Symbols: WRKY33, ATWRKY33 | WRKY DNA-binding protein 33 | chr2:16108476-16110539 FORWARD LENGTH=519 |
| Medicago |
Medtr5g074200.1 |
362 |
67.5 |
80.2 |
| WRKY family transcription factor | HC | chr5:31495722-31496764 | 20130731 |
| Soybean |
Glyma14g37960.1 |
350 |
69.9 |
80.7 |
|
| LJGI |
gnl|LJGI|TC74999 |
1542 |
99.9 |
99.9 |
weakly similar to UniRef100_Q6B6R4 Cluster: Transcription factor WRKY24; n=1; Oryza sativa Indica Group|Rep: Transcription factor WRKY24 - Oryza sativa subsp. indica (Rice), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2364690.1 |
length: 260 aa. |
| IPR003657 |
DNA-binding WRKY |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| Molecular Function |
GO:0043565 |
sequence-specific DNA binding |
|
|
| Gene3D |
G3DSA:2.20.25.80 |
no description |
8.6e-15 |
203-252 |
| HMMPfam |
PF03106 |
WRKY |
3.1e-16 |
211-252 |
| HMMSmart |
SM00774 |
DNA |
1.6e-13 |
211-260 |
| ProfileScan |
PS50811 |
WRKY |
15.778 |
206-251 |
| superfamily |
SSF118290 |
WRKY |
6e-13 |
202-251 |
| no_ID |
|
| HMMPanther |
PTHR31221 |
FAMILY |
3.5e-15 |
187-258 |
- Wolf-PSORT
Lj2g3v2364690.1 plas 7, chlo 2, E.R. 2, mito 1, extr 1, pero 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2364690.1 |
|