Miyakogusa Predicted Gene

Lj2g3v2353630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M844_SOYBN 797 80.5 87.7 (tr|K7M844) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G07120.1 709 71.6 81.8 | Symbols: SNX2b | sorting nexin 2B | chr5:2207065-2209355 REVERSE LENGTH=572
Medicago Medtr5g073280.1 778 79.8 85.3 | sorting nexin 2B | HC | chr5:31210033-31203698 | 20130731
Soybean Glyma14g37820.1 797 80.5 87.7  
LJGI gnl|LJGI|TC60555 1160 99.2 99.2 similar to UniRef100_A7NY69 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2353630.1 length: 592 aa.
IPR001683 Phox homologous domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007154 cell communication    
Molecular Function GO:0035091 phosphatidylinositol binding    
Gene3D G3DSA:3.30.1520.10 no description 7.1e-29 159-283
HMMPfam PF00787 PX 1.7e-21 178-282
HMMSmart SM00312 PhoX 4.7e-19 168-283
ProfileScan PS50195 PX 16.998 167-286
superfamily SSF64268 PX 5.1e-28 156-286
IPR015404 Vps5 C-terminal
HMMPfam PF09325 Vps5 7.2e-27 345-582
no_ID  
Coil coil coiled-coil NA 352-387
477-498
512-554
HMMPanther PTHR10555 SORTING 7.8e-233 105-592
HMMPanther PTHR10555:SF65 PHOX 7.8e-233 105-592
Seg seg seg NA 19-33
65-76
88-101
140-159
474-489
superfamily SSF103657 BAR/IMD 2.4e-06 343-592
Wolf-PSORT
Lj2g3v2353630.1	chlo 12, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2353630.1 Not targeted -40.281 -0.576 -1.004 54.01% -38.701