Miyakogusa Predicted Gene

Lj2g3v2314890.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JHF7_SOYBN 1489 78.7 87.4 (tr|I1JHF7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G51770.2 1149 62.8 81.0 | Symbols: ETO1 | tetratricopeptide repeat (TPR)-containing protein | chr3:19200328-19203998 REVERSE LENGTH=959
Medicago Medtr3g465430.1 1370 71.8 83.6 | ethylene-overproduction protein | HC | chr3:26470454-26475179 | 20130731
Soybean Glyma02g39460.1 1489 78.7 87.4  
LJGI gnl|LJGI|FS362145 474 83.3 83.3 similar to UniRef100_A7NYB1 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2314890.2 length: 912 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.0098 736-766
867-897
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 1.7e-09 203-303
superfamily SSF54695 POZ 1.2e-10 206-305
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.9e-09 662-806
814-908
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 7.947 535-568
735-768
864-897
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.25 406-439
535-568
735-768
864-897
ProfileScan PS50005 TPR 7.523 406-439
535-568
735-768
864-897
no_ID  
Coil coil coiled-coil NA 780-808
HMMPanther PTHR23083 TETRATRICOPEPTIDE 2.8e-261 359-908
HMMPanther PTHR23083:SF85 PREDICTED 2.8e-261 359-908
Seg seg seg NA 34-47
627-640
superfamily SSF48452 TPR-like 0.0005 499-764
391-529
superfamily SSF81901 HCP-like 9.2e-15 664-896
Wolf-PSORT
Lj2g3v2314890.2	nucl 7.5, nucl_plas 4.5, cysk 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2314890.2