Miyakogusa Predicted Gene

Lj2g3v2280600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LLM4_SOYBN 844 58.4 70.5 (tr|I1LLM4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G58610.1 431 46.7 63.2 | Symbols: | PHD finger transcription factor, putative | chr5:23686771-23691053 REVERSE LENGTH=1065
Medicago Medtr3g464550.1 902 52.9 66.1 | PHD zinc finger protein | HC | chr3:25940691-25947645 | 20130731
Soybean Glyma11g27510.1 679 59.6 72.5  
LJGI gnl|LJGI|AI967555 97.6 79.3 79.3 similar to UniRef100_A7NYD4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2280600.1 length: 1147 aa.
IPR000182 GNAT domain
method AccNumber shortName E-value location
Molecular Function GO:0008080 N-acetyltransferase activity    
ProfileScan PS51186 GNAT 10.842 861-1019
IPR001841 Zinc finger, RING-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.26 726-765
767-818
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 1.5 725-766
767-819
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 0.002 688-766
767-837
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 0.00027 721-766
767-816
IPR016181 Acyl-CoA N-acyltransferase
Gene3D G3DSA:3.40.630.30 no description 1.5e-07 900-1020
superfamily SSF55729 Acyl-CoA 6.1e-10 886-1022
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 1.8e-09 725-767
ProfileScan PS50016 ZF_PHD_2 10.184 723-768
no_ID  
HMMPanther PTHR24098 FAMILY 2.7e-41 651-1001
HMMPanther PTHR24098:SF1 SUBFAMILY 2.7e-41 651-1001
Seg seg seg NA 149-160
446-457
Wolf-PSORT
Lj2g3v2280600.1	nucl 7, chlo 3, mito 2, plas 1, cysk 1, cyto_mito 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2280600.1