Miyakogusa Predicted Gene

Lj2g3v2278550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M815_SOYBN 1019 75.5 85.6 (tr|K7M815) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G19720.1 749 54.4 72.2 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:6819926-6822610 REVERSE LENGTH=894
Medicago Medtr5g071190.1 981 73.6 83.2 | PPR containing plant-like protein | HC | chr5:30193271-30196237 | 20130731
Soybean Glyma14g37370.1 1023 75.5 85.6  
LJGI gnl|LJGI|TC73697 127 91.0 91.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2278550.1 length: 648 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.9 126-150
152-182
225-250
253-283
396-422
568-588
HMMPfam PF13041 PPR_2 1e-09 285-332
422-460
493-540
593-640
HMMTigr TIGR00756 PPR: 2.7e-08 125-150
152-186
253-285
288-322
323-356
396-423
424-458
459-488
496-528
596-629
ProfileScan PS51375 PPR 5.667 50-84
150-184
119-149
251-285
220-250
185-219
286-320
321-355
422-456
391-421
457-491
493-527
594-628
563-593
629-648
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-11 393-532
no_ID  
HMMPanther PTHR24015 FAMILY 7.6e-186 104-648
HMMPanther PTHR24015:SF105SUBFAMILY NOT 7.6e-186 104-648
Seg seg seg NA 361-377
superfamily SSF81901 HCP-like 1.4e-07 251-520
Wolf-PSORT
Lj2g3v2278550.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2278550.1