Miyakogusa Predicted Gene

Lj2g3v2220800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M7Z2_SOYBN 1223 80.9 85.4 (tr|K7M7Z2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G04270.2 855 59.7 72.2 | Symbols: RNEE/G | RNAse E/G-like | chr2:1475753-1480014 FORWARD LENGTH=871
Medicago Medtr5g069430.1 1091 71.6 77.6 | ribonuclease E/G family protein | HC | chr5:29439503-29427217 | 20130731
Soybean Glyma14g36910.1 1210 80.4 84.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2220800.1 length: 749 aa.
IPR004659 Ribonuclease E/G
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004540 ribonuclease activity    
Biological Process GO:0006396 RNA processing    
HMMTigr TIGR00757 RNaseEG: 9.5e-106 93-631
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.6e-11 280-323
superfamily SSF50249 Nucleic 3.3e-11 118-323
IPR019307 RNA-binding protein AU-1/Ribonuclease E/G
Molecular Function GO:0003723 RNA binding    
HMMPfam PF10150 RNase_E_G 9.8e-89 320-600
no_ID  
HMMPanther PTHR30001 RIBONUCLEASE 4.5e-116 66-723
Seg seg seg NA 36-51
97-111
231-243
542-553
Wolf-PSORT
Lj2g3v2220800.1	nucl 5.5, cyto_nucl 4.5, cysk 3, cyto 2.5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2220800.1