Miyakogusa Predicted Gene

Lj2g3v2220790.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MB76_SOYBN 865 91.1 95.3 (tr|I1MB76) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G04280.1 738 78.7 89.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr2:1480277-1481983 REVERSE LENGTH=568

Medicago Medtr5g069410.2 864 89.8 95.3 | calcium ion-binding protein | HC | chr5:29421692-29424174 | 20130731

Soybean Glyma14g36900.1 865 91.1 95.3

LJGI gnl|LJGI|TC68320 1225 100.0 100.0 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v2220790.1 length: 536 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31469 FAMILY 5.8e-262 96-536

Seg seg seg NA 2-30
35-48

Wolf-PSORT

Lj2g3v2220790.1 chlo 12, mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v2220790.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MB76_SOYBN	865	91.1	95.3	(tr\|I1MB76) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G04280.1	738	78.7	89.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). \| chr2:1480277-1481983 REVERSE LENGTH=568
Medicago	Medtr5g069410.2	864	89.8	95.3	\| calcium ion-binding protein \| HC \| chr5:29421692-29424174 \| 20130731
Soybean	Glyma14g36900.1	865	91.1	95.3
LJGI	gnl\|LJGI\|TC68320	1225	100.0	100.0	similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)

no_ID
Lj2g3v2220790.1				length: 536 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31469	FAMILY	5.8e-262	96-536
Seg	seg	seg	NA	2-30 35-48