Miyakogusa Predicted Gene
- Lj2g3v2207710.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JH89_SOYBN |
214 |
80.1 |
83.8 |
(tr|I1JH89) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G27590.1 |
130 |
48.4 |
58.0 |
| Symbols: | Heavy metal transport/detoxification superfamily protein | chr4:13771224-13771790 FORWARD LENGTH=156 |
| Medicago |
Medtr5g069205.1 |
140 |
72.9 |
79.2 |
| heavy metal associated domain protein, putative | HC | chr5:29294303-29294988 | 20130731 |
| Soybean |
Glyma02g38760.1 |
214 |
80.1 |
83.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2207710.1 |
length: 165 aa. |
| IPR006121 |
Heavy metal-associated domain, HMA |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0030001 |
metal ion transport |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| HMMPfam |
PF00403 |
HMA |
2.7e-11 |
51-104 |
| superfamily |
SSF55008 |
HMA, |
1.4e-10 |
41-112 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.70.100 |
no description |
1.5e-09 |
48-107 |
| HMMPanther |
PTHR22814 |
COPPER |
5.4e-43 |
7-115 |
| HMMPanther |
PTHR22814:SF49 |
SUBFAMILY |
5.4e-43 |
7-115 |
| Seg |
seg |
seg |
NA |
121-134 |
- Wolf-PSORT
Lj2g3v2207710.1 nucl 5, cyto 3, plas 3, cysk_nucl 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2207710.1 |
|